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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 851.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 884
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1820.9
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 604.9
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 623.6
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 1022.3
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 176.3
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 818.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 441.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 870.8
Min RPKM: 170.0
Std RPKM: 135.1
Median RPKM: 408.6
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
870.8
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
798.2
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
788.7
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
766.0
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
763.8
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
745.3
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
713.6
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
708.0
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
700.4
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
692.2
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
666.2
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
651.5
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
640.6
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
633.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
633.0
GTEX-XPT6-1626-SM-4B655
20-29 years, male
626.8
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
624.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
619.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
618.3
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
614.8
GTEX-RN64-2326-SM-48FDW
50-59 years, male
609.1
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
587.8
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
581.5
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
579.9
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
579.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
564.0
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
561.8
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
558.0
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
552.5
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
547.1
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
545.7
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
542.2
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
542.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
536.2
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
531.6
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
523.1
GTEX-X261-2326-SM-4PQYU
50-59 years, male
514.8
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
514.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
505.4
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
501.2
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
500.1
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
497.6
GTEX-S33H-0126-SM-4AD62
30-39 years, male
497.2
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
494.1
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
487.9
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
483.9
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
483.1
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
482.5
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
478.2
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
473.9
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
472.5
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
472.3
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
471.5
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
471.3
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
469.6
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
467.1
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
464.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
460.9
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
460.0
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
460.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
457.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
451.9
GTEX-V955-1926-SM-4KL1L
60-69 years, male
449.2
GTEX-R55D-0126-SM-48FEL
50-59 years, male
445.2
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
442.1
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
439.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
438.4
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
436.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
434.7
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
433.3
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
430.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
429.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
420.5
GTEX-QLQW-1026-SM-447A9
30-39 years, male
419.7
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
417.3
GTEX-13111-1526-SM-5EGJX
50-59 years, male
415.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
415.6
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
415.1
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
414.8
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
412.5
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
412.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
410.8
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
410.6
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
410.3
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
409.7
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
408.9
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
408.3
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
405.1
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
404.6
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
404.1
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
400.1
GTEX-S95S-1126-SM-4B64E
60-69 years, male
399.4
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
399.1
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
398.5
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
397.6
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
396.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
395.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
393.0
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
390.6
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
389.5
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
389.2
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
382.3
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
382.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
379.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
379.6
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
378.4
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
377.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
373.2
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
372.5
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
369.6
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
369.6
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
369.5
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
367.5
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
363.1
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
362.8
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
360.4
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
358.8
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
356.7
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
355.7
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
351.7
GTEX-11DXZ-2126-SM-59881
50-59 years, male
350.8
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
350.8
GTEX-REY6-0126-SM-48FDT
60-69 years, male
348.6
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
346.9
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
344.2
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
343.6
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
340.0
GTEX-117XS-2026-SM-5GID1
60-69 years, male
338.7
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
338.5
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
336.3
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
331.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
329.2
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
327.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
323.1
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
321.1
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
319.3
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
318.4
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
316.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
314.2
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
307.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
305.4
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
304.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
300.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
295.5
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
293.4
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
293.0
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
291.9
GTEX-11OF3-1826-SM-5987N
60-69 years, male
291.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
290.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
286.0
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
284.4
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
282.9
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
280.5
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
272.0
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
268.3
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
264.3
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
256.2
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
254.3
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
252.1
GTEX-13112-0226-SM-5P9IV
50-59 years, male
250.5
GTEX-Y111-2426-SM-4TT23
50-59 years, male
249.6
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
247.6
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
244.5
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
243.2
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
220.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
217.0
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
208.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
207.0
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
198.0
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
194.2
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
178.6
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
170.0
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.