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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3575.1
Min RPKM: 678.1
Std RPKM: 548.5
Median RPKM: 1723.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
3575.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
3360.1
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
3143.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
3086.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
3086.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
3082.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
2993.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
2917.1
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
2729.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
2720.0
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
2611.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
2558.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
2546.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
2498.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
2478.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
2441.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
2438.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
2417.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
2416.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
2356.6
GTEX-13111-0126-SM-5EGHO
50-59 years, male
2284.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
2182.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
2161.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
2157.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
2146.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
2086.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
2036.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
2024.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
2020.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
1974.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
1958.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
1947.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
1943.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
1933.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
1930.8
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
1904.7
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
1896.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
1880.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
1852.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
1829.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
1824.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
1818.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
1813.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
1804.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
1796.1
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
1792.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
1792.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
1774.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
1758.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
1746.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
1733.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
1725.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
1721.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
1717.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
1717.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
1716.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
1710.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
1706.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
1702.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
1682.2
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
1667.4
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
1654.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
1616.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
1601.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
1589.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
1584.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
1551.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
1525.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
1504.7
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
1501.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
1497.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
1488.3
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
1481.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
1480.2
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
1476.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
1474.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
1465.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
1464.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
1462.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
1454.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
1444.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
1439.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
1437.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
1434.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
1424.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
1421.5
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
1415.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
1401.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
1379.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
1377.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
1339.8
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
1339.1
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
1336.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
1316.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
1286.1
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
1234.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
1233.1
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
1200.8
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
1200.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
1179.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
1122.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
1016.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
999.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
678.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.