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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1940.9
Min RPKM: 320.9
Std RPKM: 290.4
Median RPKM: 954.2
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
1940.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
1828.1
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1612.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
1516.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1429.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
1402.3
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
1325.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1318.3
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1317.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
1294.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1283.4
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1251.6
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
1246.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
1240.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1208.5
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
1181.3
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1174.6
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1174.4
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1172.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1166.0
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1148.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
1144.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1133.6
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1127.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1116.7
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1114.8
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1111.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1107.8
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1106.6
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1093.6
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1091.4
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1090.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
1084.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
1069.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1063.0
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1062.0
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
1054.8
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1052.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1052.6
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
1050.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1034.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1032.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1028.1
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1012.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1007.5
GTEX-11I78-1926-SM-59878
50-59 years, female
1001.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
977.8
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
961.3
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
954.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
940.7
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
932.6
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
932.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
928.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
925.2
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
896.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
889.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
881.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
859.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
859.0
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
857.4
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
851.2
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
841.3
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
818.7
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
808.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
800.1
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
791.9
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
786.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
766.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
753.4
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
740.5
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
733.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
724.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
718.9
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
711.7
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
700.3
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
697.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
696.7
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
695.2
GTEX-Q734-0726-SM-48TZP
40-49 years, female
684.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
682.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
680.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
664.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
654.4
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
632.4
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
608.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
599.0
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
598.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
595.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
592.4
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
587.9
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
582.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
566.8
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
536.6
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
521.1
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
453.3
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
414.1
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
320.9
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.