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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1423.7
Min RPKM: 174.0
Std RPKM: 263.6
Median RPKM: 547.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
1423.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1351.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1180.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
1167.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
1098.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
1096.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
1072.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
1055.0
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
953.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
943.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
940.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
911.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
909.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
906.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
902.4
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
876.1
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
836.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
816.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
794.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
781.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
766.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
760.8
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
752.7
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
737.4
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
724.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
720.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
707.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
697.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
687.8
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
671.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
668.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
637.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
628.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
628.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
627.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
616.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
613.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
595.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
593.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
579.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
568.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
560.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
559.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
558.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
555.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
549.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
547.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
546.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
542.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
537.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
531.6
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
522.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
520.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
512.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
509.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
506.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
506.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
504.8
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
499.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
499.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
497.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
494.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
480.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
458.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
448.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
441.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
438.7
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
421.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
420.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
410.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
403.6
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
400.7
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
395.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
382.4
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
369.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
361.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
358.3
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
334.4
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
327.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
317.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
312.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
299.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
294.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
286.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
284.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
279.2
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
273.0
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
248.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
245.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
235.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
234.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
223.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
213.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
174.0
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.