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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 2728.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1048.2
Min RPKM: 264.2
Std RPKM: 121.9
Median RPKM: 580.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
1048.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
980.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
840.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
815.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
777.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
767.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
765.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
755.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
749.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
743.1
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
741.6
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
724.4
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
722.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
720.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
702.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
688.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
685.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
685.0
GTEX-WL46-2926-SM-3LK82
50-59 years, male
682.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
677.4
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
675.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
663.7
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
663.2
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
660.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
659.4
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
651.7
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
647.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
645.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
642.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
641.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
638.6
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
637.8
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
637.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
635.9
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
635.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
633.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
626.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
626.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
617.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
613.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
609.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
608.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
602.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
601.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
599.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
597.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
593.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
592.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
591.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
590.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
584.7
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
584.4
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
583.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
583.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
580.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
580.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
580.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
580.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
579.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
578.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
577.7
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
575.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
570.1
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
567.2
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
567.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
565.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
564.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
564.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
559.6
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
557.6
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
555.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
550.0
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
546.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
544.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
536.0
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
532.0
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
524.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
522.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
521.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
518.8
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
518.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
510.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
509.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
509.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
506.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
502.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
499.9
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
498.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
495.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
489.7
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
488.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
488.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
486.4
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
480.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
478.2
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
473.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
473.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
465.6
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
462.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
455.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
448.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
442.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
440.6
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
435.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
426.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
407.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
400.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
393.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
384.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
383.2
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
366.4
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
335.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
293.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
264.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 605.8
Samples: 108
Max RPKM: 1258.1
Min RPKM: 206.6
Std RPKM: 159.0
Median RPKM: 590.3
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
1258.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
950.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
931.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
896.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
894.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
884.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
880.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
879.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
826.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
823.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
789.2
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
787.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
783.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
782.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
781.5
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
773.4
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
772.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
732.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
723.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
716.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
715.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
714.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
704.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
693.4
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
682.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
680.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
679.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
676.4
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
674.9
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
668.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
664.8
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
658.4
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
654.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
653.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
652.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
649.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
649.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
644.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
644.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
643.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
642.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
641.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
635.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
630.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
627.5
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
625.0
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
624.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
624.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
620.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
615.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
611.2
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
610.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
603.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
593.9
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
586.7
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
586.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
584.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
583.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
583.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
582.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
580.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
579.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
576.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
576.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
576.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
573.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
570.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
569.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
562.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
560.5
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
559.9
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
555.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
555.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
553.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
551.5
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
550.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
549.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
540.6
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
536.4
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
520.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
506.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
506.1
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
504.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
501.0
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
500.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
496.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
491.9
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
491.1
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
488.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
487.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
483.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
476.2
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
471.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
463.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
437.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
432.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
426.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
399.9
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
379.6
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
375.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
368.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
356.5
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
356.0
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
325.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
277.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
274.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
259.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
206.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.