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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1135.0
Min RPKM: 148.0
Std RPKM: 181.3
Median RPKM: 552.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
1135.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
1041.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
975.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
974.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
866.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
814.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
810.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
802.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
783.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
781.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
731.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
722.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
714.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
713.9
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
709.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
690.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
688.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
687.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
685.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
684.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
684.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
683.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
683.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
674.4
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
674.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
673.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
669.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
668.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
660.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
655.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
650.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
647.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
642.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
638.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
636.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
635.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
632.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
626.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
617.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
615.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
610.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
609.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
608.4
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
606.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
604.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
601.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
600.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
590.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
588.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
581.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
581.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
574.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
573.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
570.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
567.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
567.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
562.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
554.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
552.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
543.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
542.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
540.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
537.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
531.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
531.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
529.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
529.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
528.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
528.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
525.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
512.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
511.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
510.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
508.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
507.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
505.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
504.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
502.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
498.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
484.3
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
477.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
475.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
461.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
454.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
443.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
441.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
440.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
428.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
425.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
420.5
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
387.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
380.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
378.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
362.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
358.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
352.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
348.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
348.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
335.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
331.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
324.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
314.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
311.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
299.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
281.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
281.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
280.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
261.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
259.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
255.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
255.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
247.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
245.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
210.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
197.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
181.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
148.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.