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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 180.4
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 235.5
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 171.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 218.2
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 204.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 188.4
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 139.6
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 250.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 204.1
Min RPKM: 20.9
Std RPKM: 25.9
Median RPKM: 74.0
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
204.1
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
166.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
161.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
137.6
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
129.7
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
128.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
126.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
123.9
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
121.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
115.1
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
110.0
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
105.1
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
104.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
102.2
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
102.1
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
101.5
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
101.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
100.6
GTEX-12696-0826-SM-5EGGE
60-69 years, male
98.7
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
98.0
GTEX-13113-1326-SM-5GCOI
60-69 years, female
97.5
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
97.0
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
96.1
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
94.3
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
94.0
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
92.9
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
92.8
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
92.4
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
92.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
90.9
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
90.6
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
90.5
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
90.3
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
89.8
GTEX-P78B-1326-SM-3P611
40-49 years, female
88.1
GTEX-QEL4-1226-SM-447A4
50-59 years, male
88.1
GTEX-R53T-0326-SM-48FEC
50-59 years, female
86.3
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
85.0
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
84.9
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
83.8
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
82.9
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
82.4
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
82.0
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
82.0
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
81.6
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
81.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
81.1
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
79.2
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
79.2
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
78.2
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
77.3
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
77.2
GTEX-1399T-0826-SM-5IFES
60-69 years, male
76.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
75.4
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
74.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
74.3
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
74.3
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
74.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
74.1
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
74.0
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
74.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
74.0
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
73.3
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
73.0
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
72.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
72.2
GTEX-YECK-1926-SM-4W21H
60-69 years, male
72.1
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
70.6
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
70.1
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
69.5
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
69.5
GTEX-13112-1426-SM-5EGH8
50-59 years, male
69.0
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
69.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
68.7
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
68.6
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
68.3
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
67.4
GTEX-RN64-1826-SM-48FDV
50-59 years, male
67.0
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
66.5
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
66.4
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
66.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
65.6
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
65.3
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
65.1
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
64.5
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
63.2
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
63.1
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
62.9
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
62.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
62.4
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
61.7
GTEX-11ZUS-2526-SM-59872
30-39 years, male
61.4
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
61.4
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
61.1
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
61.0
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
60.5
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
60.2
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
60.1
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
59.2
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
59.1
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
58.6
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
58.4
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
57.7
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
57.7
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
57.6
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
56.7
GTEX-11GSP-0626-SM-5986T
60-69 years, female
56.1
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
55.7
GTEX-S33H-1626-SM-4AD68
30-39 years, male
54.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
52.5
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
50.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
47.1
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
46.8
GTEX-X261-1726-SM-4PQYT
50-59 years, male
46.6
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
45.3
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
44.0
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
43.8
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
38.1
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
20.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.