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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 443.9
Min RPKM: 111.3
Std RPKM: 64.9
Median RPKM: 235.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
443.9
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
443.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
413.7
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
409.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
384.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
368.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
359.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
356.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
354.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
354.1
GTEX-PX3G-0926-SM-48U12
20-29 years, female
353.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
346.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
334.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
328.2
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
325.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
324.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
321.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
318.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
314.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
311.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
311.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
311.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
310.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
309.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
305.2
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
301.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
300.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
300.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
299.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
297.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
284.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
283.7
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
283.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
282.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
282.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
279.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
272.4
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
270.3
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
269.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
268.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
268.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
264.9
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
258.1
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
256.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
256.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
255.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
250.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
249.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
241.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
239.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
237.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
237.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
234.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
230.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
228.2
GTEX-144GN-2126-SM-5O99D
50-59 years, male
225.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
225.6
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
225.4
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
223.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
223.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
223.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
222.8
GTEX-13111-0126-SM-5EGHO
50-59 years, male
222.5
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
221.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
220.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
220.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
219.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
219.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
217.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
215.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
214.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
213.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
213.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
212.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
212.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
212.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
209.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
209.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
209.0
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
208.7
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
208.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
205.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
205.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
203.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
200.8
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
198.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
198.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
195.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
195.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
195.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
192.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
190.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
189.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
183.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
182.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
181.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
180.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
180.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
175.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
174.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
173.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
172.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
163.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
111.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.