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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 436.0
Min RPKM: 57.6
Std RPKM: 88.8
Median RPKM: 212.5
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
436.0
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
416.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
409.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
376.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
374.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
371.9
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
364.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
355.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
350.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
348.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
346.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
338.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
338.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
315.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
311.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
293.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
293.1
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
288.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
288.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
279.0
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
268.5
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
263.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
260.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
257.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
252.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
250.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
250.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
249.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
247.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
245.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
244.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
240.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
237.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
234.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
234.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
232.5
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
232.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
231.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
229.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
219.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
218.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
218.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
217.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
217.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
214.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
212.9
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
212.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
212.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
210.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
209.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
207.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
205.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
201.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
201.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
198.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
198.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
198.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
194.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
189.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
188.6
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
185.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
179.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
172.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
171.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
170.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
169.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
168.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
167.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
164.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
159.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
153.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
148.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
146.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
133.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
129.4
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
128.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
125.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
117.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
112.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
112.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
104.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
102.5
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
100.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
99.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
89.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
83.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
81.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
80.1
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
75.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
73.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
72.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
70.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
59.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
57.6
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.