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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 564.9
Min RPKM: 129.9
Std RPKM: 73.3
Median RPKM: 305.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
564.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
473.6
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
438.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
433.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
427.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
412.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
404.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
403.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
403.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
402.7
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
402.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
401.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
388.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
386.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
382.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
380.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
379.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
379.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
375.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
370.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
369.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
364.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
364.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
363.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
362.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
362.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
361.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
360.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
359.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
358.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
355.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
354.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
351.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
349.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
344.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
344.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
337.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
336.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
330.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
329.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
327.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
327.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
326.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
324.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
324.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
323.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
321.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
321.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
317.2
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
315.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
313.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
313.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
311.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
309.7
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
308.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
308.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
307.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
306.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
305.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
303.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
302.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
300.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
296.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
296.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
291.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
288.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
288.5
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
288.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
287.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
283.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
281.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
281.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
281.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
278.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
278.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
276.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
271.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
271.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
269.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
268.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
265.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
260.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
258.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
257.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
256.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
254.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
252.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
249.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
249.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
248.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
248.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
246.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
246.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
241.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
238.2
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
236.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
235.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
234.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
228.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
227.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
227.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
220.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
219.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
214.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
203.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
199.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
198.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
197.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
192.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
189.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
186.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
184.1
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
175.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
170.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
159.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
153.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
129.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.