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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 388.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 378.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 743.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 618.7
Min RPKM: 95.3
Std RPKM: 93.8
Median RPKM: 218.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
618.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
596.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
576.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
539.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
538.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
523.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
472.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
454.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
445.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
441.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
428.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
423.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
401.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
399.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
397.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
395.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
388.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
381.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
380.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
380.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
377.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
372.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
369.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
356.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
353.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
349.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
345.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
343.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
340.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
335.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
334.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
332.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
331.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
331.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
326.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
326.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
326.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
325.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
319.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
310.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
306.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
301.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
299.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
296.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
296.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
294.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
292.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
289.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
288.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
288.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
287.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
286.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
278.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
277.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
276.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
274.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
272.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
271.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
266.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
265.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
265.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
263.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
261.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
261.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
260.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
258.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
257.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
256.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
254.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
254.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
252.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
252.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
252.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
251.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
247.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
245.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
245.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
244.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
244.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
242.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
242.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
241.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
241.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
241.0
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
240.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
239.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
238.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
237.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
236.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
235.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
235.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
230.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
229.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
229.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
228.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
228.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
228.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
226.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
226.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
226.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
225.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
225.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
225.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
221.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
221.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
221.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
218.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
218.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
217.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
217.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
216.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
216.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
216.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
216.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
215.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
215.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
214.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
214.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
213.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
212.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
212.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
212.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
209.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
208.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
208.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
207.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
207.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
206.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
205.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
205.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
204.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
203.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
202.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
201.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
198.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
197.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
195.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
194.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
193.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
190.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
190.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
189.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
189.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
189.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
189.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
187.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
187.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
186.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
186.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
185.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
184.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
184.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
183.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
182.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
182.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
181.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
180.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
179.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
179.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
178.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
178.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
176.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
176.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
175.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
175.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
174.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
174.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
174.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
174.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
174.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
173.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
170.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
167.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
167.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
167.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
166.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
165.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
162.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
161.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
161.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
160.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
159.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
159.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
159.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
158.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
155.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
151.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
151.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
151.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
148.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
147.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
146.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
145.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
144.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
144.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
142.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
141.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
140.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
139.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
136.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
135.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
131.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
131.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
129.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
128.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
128.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
127.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
126.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
126.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
125.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
120.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
115.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
110.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
95.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.