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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 277.9
Min RPKM: 81.8
Std RPKM: 42.1
Median RPKM: 146.4
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
277.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
264.5
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
254.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
250.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
249.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
233.8
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
222.9
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
221.4
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
212.6
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
205.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
203.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
194.2
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
191.4
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
190.7
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
188.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
187.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
185.6
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
183.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
182.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
181.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
179.7
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
176.2
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
173.7
GTEX-Q734-0726-SM-48TZP
40-49 years, female
173.1
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
172.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
172.0
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
169.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
168.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
168.7
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
166.8
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
163.8
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
161.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
160.7
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
159.5
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
158.5
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
157.4
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
157.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
154.4
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
153.9
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
152.6
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
151.5
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
149.0
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
148.7
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
148.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
148.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
148.1
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
147.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
146.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
146.4
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
146.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
145.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
142.8
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
142.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
140.2
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
138.5
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
137.7
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
137.6
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
137.6
GTEX-S341-0726-SM-4AD5R
40-49 years, female
137.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
137.2
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
135.6
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
134.3
GTEX-S32W-1226-SM-4AD67
50-59 years, female
133.1
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
131.9
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
131.6
GTEX-11I78-1926-SM-59878
50-59 years, female
129.3
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
129.0
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
125.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
125.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
124.6
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
123.8
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
122.3
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
121.9
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
119.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
118.1
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
118.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
116.9
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
115.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
114.7
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
110.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
109.2
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
106.8
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
105.3
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
104.6
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
104.5
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
100.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
100.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
98.6
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
98.1
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
92.2
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
90.9
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
90.3
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
89.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
87.9
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
87.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
86.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
81.8
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.