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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 168.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 138.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 96.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 436.6
Min RPKM: 95.2
Std RPKM: 53.3
Median RPKM: 195.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
436.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
380.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
374.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
339.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
339.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
332.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
305.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
300.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
299.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
296.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
292.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
291.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
288.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
286.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
283.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
281.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
281.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
280.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
277.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
277.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
277.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
275.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
273.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
273.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
271.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
270.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
268.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
268.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
267.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
265.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
265.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
264.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
262.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
258.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
254.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
251.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
251.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
249.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
248.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
247.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
246.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
246.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
245.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
245.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
244.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
239.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
238.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
234.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
233.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
232.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
232.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
231.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
228.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
228.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
228.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
227.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
227.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
227.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
223.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
222.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
222.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
221.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
221.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
221.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
221.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
221.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
220.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
217.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
215.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
215.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
214.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
214.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
213.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
213.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
212.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
212.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
211.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
211.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
211.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
210.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
210.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
209.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
208.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
207.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
206.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
205.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
204.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
204.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
203.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
203.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
202.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
202.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
202.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
202.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
201.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
200.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
200.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
200.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
200.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
199.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
198.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
198.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
197.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
196.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
195.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
195.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
195.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
195.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
194.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
193.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
193.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
193.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
191.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
189.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
189.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
189.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
188.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
188.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
188.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
188.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
187.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
187.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
186.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
185.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
185.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
185.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
185.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
184.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
184.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
184.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
184.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
183.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
183.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
183.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
182.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
182.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
182.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
180.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
179.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
178.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
178.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
178.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
177.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
176.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
175.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
175.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
174.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
174.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
174.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
172.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
172.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
172.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
171.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
171.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
170.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
168.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
167.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
165.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
165.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
165.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
164.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
164.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
164.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
163.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
162.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
161.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
160.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
160.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
160.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
159.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
159.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
158.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
157.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
157.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
157.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
156.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
154.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
154.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
153.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
153.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
153.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
152.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
151.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
148.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
147.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
146.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
146.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
145.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
145.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
144.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
142.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
140.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
139.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
139.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
138.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
138.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
138.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
138.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
137.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
136.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
136.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
135.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
134.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
134.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
133.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
131.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
119.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
117.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
116.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
113.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
109.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
107.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
103.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
95.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.