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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 111.5
Min RPKM: 36.4
Std RPKM: 17.1
Median RPKM: 68.5
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
111.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
109.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
109.8
GTEX-RU72-2226-SM-46MUE
50-59 years, female
108.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
106.5
GTEX-P78B-1926-SM-3P616
40-49 years, female
100.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
98.0
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
97.6
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
94.3
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
93.7
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
91.6
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
91.5
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
90.7
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
90.0
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
89.7
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
89.0
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
88.5
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
87.6
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
87.2
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
87.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
87.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
86.5
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
86.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
84.0
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
83.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
83.8
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
83.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
83.0
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
83.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
82.5
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
81.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
81.8
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
81.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
80.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
80.3
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
76.6
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
76.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
76.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
75.7
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
75.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
75.4
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
74.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
73.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
72.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
70.6
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
69.5
GTEX-S341-0726-SM-4AD5R
40-49 years, female
69.2
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
68.6
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
68.5
GTEX-Q734-0726-SM-48TZP
40-49 years, female
68.1
GTEX-11I78-1926-SM-59878
50-59 years, female
68.0
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
67.8
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
67.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
66.6
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
66.4
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
66.0
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
66.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
65.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
65.6
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
65.6
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
65.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
64.9
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
64.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
64.1
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
61.5
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
60.9
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
60.9
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
60.8
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
60.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
59.8
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
59.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
58.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
58.0
GTEX-S32W-1226-SM-4AD67
50-59 years, female
57.7
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
57.7
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
57.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
55.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
55.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
55.2
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
55.1
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
55.0
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
54.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
54.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
53.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
53.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
53.3
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
52.0
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
50.2
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
49.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
47.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
46.9
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
45.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
44.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
43.5
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
42.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
42.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
36.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.