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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 606.9
Min RPKM: 6.2
Std RPKM: 154.0
Median RPKM: 179.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
606.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
531.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
517.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
513.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
495.9
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
494.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
491.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
483.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
475.6
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
472.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
457.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
452.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
425.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
416.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
415.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
412.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
405.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
400.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
387.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
383.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
362.9
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
358.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
347.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
341.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
321.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
311.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
307.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
295.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
292.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
289.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
288.2
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
283.9
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
279.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
275.5
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
274.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
265.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
263.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
248.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
222.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
214.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
207.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
194.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
183.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
182.6
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
182.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
181.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
179.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
178.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
173.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
171.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
168.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
165.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
159.0
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
158.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
157.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
156.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
155.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
155.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
144.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
141.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
135.6
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
127.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
126.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
121.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
116.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
114.3
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
108.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
105.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
104.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
95.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
95.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
91.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
89.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
89.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
81.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
72.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
68.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
65.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
64.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
63.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
60.5
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
60.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
60.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
50.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
49.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
48.3
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
34.7
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
21.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
20.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
19.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
15.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
8.9
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
7.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
6.2
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.