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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 935.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 1004.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 758.2
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 1020.8
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 1052.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 814.7
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 1585.3
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 1173.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1436.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 342.5
Min RPKM: 137.9
Std RPKM: 45.4
Median RPKM: 232.3
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
342.5
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
334.8
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
330.3
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
327.5
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
324.5
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
315.2
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
314.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
314.2
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
311.6
GTEX-117XS-2026-SM-5GID1
60-69 years, male
309.4
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
309.0
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
304.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
304.1
GTEX-11DXZ-2126-SM-59881
50-59 years, male
301.6
GTEX-13112-0226-SM-5P9IV
50-59 years, male
299.2
GTEX-Y111-2426-SM-4TT23
50-59 years, male
298.0
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
297.6
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
297.1
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
295.3
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
295.3
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
293.1
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
291.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
288.9
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
288.5
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
287.6
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
287.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
286.9
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
286.4
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
285.2
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
285.0
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
284.2
GTEX-11OF3-1826-SM-5987N
60-69 years, male
283.9
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
283.5
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
281.7
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
281.5
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
279.5
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
278.7
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
276.0
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
274.1
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
272.2
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
272.1
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
270.0
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
269.9
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
266.8
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
265.1
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
264.5
GTEX-REY6-0126-SM-48FDT
60-69 years, male
264.3
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
262.3
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
261.4
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
261.3
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
260.2
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
259.6
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
258.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
257.9
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
256.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
256.3
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
256.1
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
255.2
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
255.1
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
252.6
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
251.2
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
250.6
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
250.1
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
249.7
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
249.4
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
249.1
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
247.6
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
246.0
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
246.0
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
245.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
245.5
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
243.5
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
242.6
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
242.2
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
241.7
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
241.1
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
240.2
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
239.9
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
236.1
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
236.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
235.5
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
235.0
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
234.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
234.4
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
233.5
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
233.0
GTEX-QLQW-1026-SM-447A9
30-39 years, male
231.6
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
231.5
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
231.3
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
231.0
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
230.4
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
230.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
229.5
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
228.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
226.4
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
225.4
GTEX-S33H-0126-SM-4AD62
30-39 years, male
225.3
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
224.6
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
223.6
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
223.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
223.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
222.9
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
222.3
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
221.3
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
220.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
218.7
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
218.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
217.1
GTEX-R55C-1426-SM-48FED
40-49 years, male
216.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
215.5
GTEX-12696-0226-SM-5EGL3
60-69 years, male
214.9
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
214.0
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
212.9
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
211.4
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
211.4
GTEX-X261-2326-SM-4PQYU
50-59 years, male
210.8
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
210.3
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
210.0
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
210.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
208.3
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
207.9
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
207.9
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
207.8
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
207.6
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
207.4
GTEX-13111-1526-SM-5EGJX
50-59 years, male
206.7
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
206.7
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
204.0
GTEX-S95S-1126-SM-4B64E
60-69 years, male
203.8
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
200.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
200.3
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
198.8
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
198.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
198.2
GTEX-RN64-2326-SM-48FDW
50-59 years, male
197.5
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
194.7
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
194.0
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
193.3
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
192.2
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
191.7
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
190.9
GTEX-R55D-0126-SM-48FEL
50-59 years, male
188.4
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
187.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
187.6
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
187.3
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
187.0
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
185.2
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
184.2
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
182.9
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
179.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
179.2
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
178.0
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
175.2
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
174.4
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
174.3
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
173.3
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
172.3
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
171.8
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
170.5
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
169.9
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
169.8
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
169.4
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
164.8
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
161.3
GTEX-XPT6-1626-SM-4B655
20-29 years, male
158.5
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
157.1
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
154.6
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
154.2
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
149.4
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
148.4
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
142.2
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
137.9
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.