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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 267.9
Min RPKM: 112.9
Std RPKM: 27.9
Median RPKM: 168.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
267.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
248.1
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
240.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
227.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
221.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
220.8
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
214.8
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
213.6
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
210.6
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
210.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
205.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
203.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
203.3
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
198.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
197.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
195.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
195.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
193.6
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
190.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
189.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
188.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
188.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
187.3
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
185.8
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
185.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
184.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
182.2
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
180.9
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
180.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
180.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
180.6
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
180.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
179.7
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
179.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
179.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
179.2
GTEX-144GN-2126-SM-5O99D
50-59 years, male
176.9
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
175.9
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
175.6
GTEX-13111-0126-SM-5EGHO
50-59 years, male
175.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
175.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
174.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
173.1
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
172.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
171.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
171.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
170.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
170.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
170.4
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
169.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
168.8
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
168.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
168.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
167.3
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
167.3
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
167.2
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
166.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
166.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
165.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
164.8
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
163.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
163.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
161.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
161.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
160.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
159.3
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
159.3
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
158.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
158.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
157.5
GTEX-QV31-0126-SM-447BP
30-39 years, male
156.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
156.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
155.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
155.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
153.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
153.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
151.6
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
150.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
150.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
149.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
148.6
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
147.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
146.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
145.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
145.3
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
144.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
143.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
143.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
142.5
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
140.1
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
139.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
138.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
136.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
136.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
133.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
132.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
131.0
GTEX-PX3G-0926-SM-48U12
20-29 years, female
130.3
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
130.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
127.8
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
126.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
123.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
116.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
112.9
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.