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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 416.1
Min RPKM: 111.6
Std RPKM: 61.4
Median RPKM: 246.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
416.1
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
404.7
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
380.4
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
373.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
365.1
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
361.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
354.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
347.9
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
334.7
GTEX-RU72-2226-SM-46MUE
50-59 years, female
331.6
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
327.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
320.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
319.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
314.5
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
310.3
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
299.9
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
299.2
GTEX-11I78-1926-SM-59878
50-59 years, female
298.2
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
296.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
295.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
293.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
289.2
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
287.9
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
280.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
280.1
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
279.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
274.7
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
272.9
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
272.5
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
272.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
271.9
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
270.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
268.6
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
268.3
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
265.8
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
261.3
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
259.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
258.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
258.4
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
258.4
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
258.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
255.6
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
253.9
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
252.9
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
251.8
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
250.5
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
250.3
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
247.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
246.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
245.8
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
243.7
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
242.1
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
238.0
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
231.7
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
231.7
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
230.7
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
228.5
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
222.9
GTEX-S32W-1226-SM-4AD67
50-59 years, female
222.3
GTEX-Q734-0726-SM-48TZP
40-49 years, female
221.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
221.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
220.2
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
216.8
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
215.7
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
214.2
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
214.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
209.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
209.8
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
209.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
208.0
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
207.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
206.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
204.0
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
203.8
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
202.2
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
200.0
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
199.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
195.2
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
188.0
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
186.7
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
185.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
183.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
180.7
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
180.6
GTEX-QCQG-1426-SM-48U22
50-59 years, female
176.4
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
173.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
172.0
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
169.8
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
169.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
168.7
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
167.0
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
164.2
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
158.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
152.9
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
137.6
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
131.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
111.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.