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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 144.1
Min RPKM: 9.1
Std RPKM: 28.5
Median RPKM: 79.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
144.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
139.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
139.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
137.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
133.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
127.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
127.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
124.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
123.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
121.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
121.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
119.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
117.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
116.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
115.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
113.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
110.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
108.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
108.4
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
107.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
102.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
101.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
100.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
98.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
97.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
96.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
96.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
94.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
94.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
93.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
93.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
91.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
90.5
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
90.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
89.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
89.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
88.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
88.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
88.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
87.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
87.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
87.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
86.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
85.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
84.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
84.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
84.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
83.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
83.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
82.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
82.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
82.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
81.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
80.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
80.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
80.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
80.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
80.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
79.8
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
79.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
79.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
78.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
78.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
78.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
77.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
76.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
76.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
76.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
74.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
74.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
73.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
72.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
69.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
67.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
66.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
66.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
64.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
63.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
62.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
62.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
61.9
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
61.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
61.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
61.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
59.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
59.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
57.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
57.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
57.6
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
56.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
56.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
55.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
55.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
54.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
52.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
51.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
50.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
50.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
49.3
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
48.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
47.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
46.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
46.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
46.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
46.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
43.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
41.6
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
41.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
37.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
37.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
36.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
35.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
25.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
17.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
14.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
9.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
9.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.