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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 241.3
Min RPKM: 42.7
Std RPKM: 38.3
Median RPKM: 118.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
241.3
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
213.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
209.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
203.2
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
202.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
191.8
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
186.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
186.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
183.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
176.2
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
173.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
173.5
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
171.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
167.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
165.4
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
165.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
164.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
162.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
161.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
157.5
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
155.9
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
154.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
153.2
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
153.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
151.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
149.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
147.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
143.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
143.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
143.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
142.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
139.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
138.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
137.7
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
135.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
129.3
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
128.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
127.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
127.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
126.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
126.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
126.0
GTEX-144GN-2126-SM-5O99D
50-59 years, male
124.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
123.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
123.1
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
123.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
122.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
122.3
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
120.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
119.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
119.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
118.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
118.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
116.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
116.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
115.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
114.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
114.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
114.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
111.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
111.6
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
111.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
111.3
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
110.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
110.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
107.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
107.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
106.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
106.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
105.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
104.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
103.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
102.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
102.3
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
100.5
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
99.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
99.5
GTEX-PX3G-0926-SM-48U12
20-29 years, female
98.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
98.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
97.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
97.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
96.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
96.3
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
95.9
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
94.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
92.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
91.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
91.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
86.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
84.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
83.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
82.9
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
82.3
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
80.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
70.6
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
70.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
68.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
68.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
61.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
57.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
57.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
52.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
50.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
42.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.