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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 73.1
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 282.6
Min RPKM: 51.4
Std RPKM: 40.8
Median RPKM: 149.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
282.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
236.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
229.6
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
220.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
213.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
212.8
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
212.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
210.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
201.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
191.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
190.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
189.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
187.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
187.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
186.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
185.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
184.9
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
184.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
183.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
183.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
182.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
182.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
182.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
181.8
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
178.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
177.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
177.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
177.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
176.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
176.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
176.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
173.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
173.5
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
173.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
172.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
171.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
171.6
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
168.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
167.7
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
167.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
167.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
166.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
165.2
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
162.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
162.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
160.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
159.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
156.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
155.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
154.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
153.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
152.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
151.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
151.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
150.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
150.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
150.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
148.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
148.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
147.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
147.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
146.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
145.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
144.2
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
141.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
140.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
140.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
140.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
140.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
140.1
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
139.5
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
136.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
134.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
134.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
130.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
129.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
128.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
127.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
126.9
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
126.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
126.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
125.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
124.3
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
123.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
122.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
122.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
121.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
121.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
119.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
116.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
116.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
109.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
109.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
107.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
104.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
103.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
100.4
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
93.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
92.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
90.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
90.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
90.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
89.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
89.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
86.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
86.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
86.3
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
84.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
82.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
81.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
75.6
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
59.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
59.2
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
51.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 144.1
Samples: 108
Max RPKM: 271.4
Min RPKM: 54.4
Std RPKM: 46.1
Median RPKM: 139.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
271.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
253.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
239.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
234.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
230.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
224.4
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
220.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
210.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
201.5
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
196.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
196.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
194.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
190.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
189.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
188.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
188.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
187.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
186.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
186.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
184.3
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
182.7
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
180.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
180.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
179.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
179.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
179.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
178.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
177.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
177.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
173.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
171.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
171.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
170.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
168.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
167.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
167.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
166.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
165.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
164.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
164.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
164.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
164.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
160.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
157.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
157.5
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
155.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
154.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
152.5
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
149.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
148.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
146.5
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
142.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
142.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
139.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
138.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
138.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
137.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
137.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
135.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
134.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
134.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
132.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
132.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
131.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
131.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
131.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
130.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
129.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
129.5
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
129.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
129.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
128.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
128.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
128.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
125.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
123.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
121.6
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
121.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
121.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
120.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
119.8
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
119.8
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
115.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
112.5
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
110.2
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
107.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
107.7
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
107.0
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
106.6
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
102.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
93.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
89.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
89.0
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
85.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
84.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
76.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
76.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
75.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
75.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
70.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
66.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
66.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
63.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
56.9
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
56.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
55.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
54.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
54.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.