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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 300.5
Min RPKM: 90.8
Std RPKM: 40.3
Median RPKM: 177.5
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
300.5
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
290.7
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
274.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
264.7
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
263.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
263.6
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
262.2
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
253.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
248.9
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
245.4
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
238.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
235.6
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
233.1
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
230.0
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
224.5
GTEX-QCQG-1226-SM-48U23
50-59 years, female
220.5
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
220.0
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
219.8
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
219.6
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
218.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
216.8
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
213.1
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
211.7
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
209.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
207.6
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
205.0
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
203.4
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
202.8
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
197.7
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
195.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
195.4
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
194.5
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
190.9
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
190.3
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
189.4
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
187.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
185.8
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
184.9
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
183.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
182.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
182.3
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
180.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
179.7
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
179.5
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
179.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
178.7
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
178.4
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
177.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
177.4
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
176.3
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
175.2
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
175.1
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
174.8
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
174.3
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
173.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
172.6
GTEX-S341-1226-SM-4AD5S
40-49 years, female
172.3
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
171.7
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
170.1
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
168.6
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
167.5
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
167.1
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
165.0
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
164.0
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
164.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
163.5
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
163.0
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
162.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
162.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
161.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
158.9
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
156.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
155.5
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
155.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
154.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
153.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
152.8
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
152.1
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
150.4
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
149.5
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
149.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
149.0
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
147.9
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
145.3
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
141.1
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
140.9
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
135.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
135.7
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
135.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
132.9
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
129.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
125.8
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
125.4
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
121.3
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
108.6
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
90.8
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.