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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 470.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 300.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 275.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 392.2
Min RPKM: 123.9
Std RPKM: 49.6
Median RPKM: 230.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
392.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
374.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
371.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
350.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
336.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
329.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
329.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
326.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
323.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
322.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
321.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
311.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
311.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
309.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
308.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
308.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
305.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
304.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
304.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
303.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
303.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
301.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
297.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
294.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
293.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
292.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
288.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
286.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
285.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
283.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
283.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
281.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
279.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
279.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
278.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
278.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
277.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
277.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
277.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
276.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
275.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
274.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
273.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
272.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
271.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
271.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
269.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
269.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
268.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
267.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
266.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
265.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
265.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
263.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
263.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
263.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
263.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
261.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
260.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
259.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
259.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
258.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
258.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
258.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
257.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
257.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
256.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
256.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
255.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
255.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
253.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
253.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
253.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
251.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
251.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
251.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
248.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
248.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
246.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
246.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
245.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
244.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
244.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
243.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
243.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
242.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
242.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
241.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
241.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
241.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
241.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
240.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
240.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
239.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
239.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
239.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
238.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
237.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
236.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
236.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
235.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
233.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
232.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
232.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
231.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
231.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
230.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
230.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
230.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
229.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
228.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
227.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
223.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
223.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
222.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
221.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
221.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
220.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
219.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
218.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
216.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
216.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
216.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
216.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
215.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
215.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
214.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
214.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
214.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
213.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
213.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
212.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
211.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
211.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
210.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
209.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
209.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
209.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
208.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
208.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
208.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
208.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
207.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
207.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
206.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
206.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
205.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
204.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
203.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
203.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
201.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
201.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
201.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
200.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
198.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
198.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
198.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
197.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
197.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
197.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
197.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
196.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
196.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
195.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
194.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
194.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
193.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
193.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
193.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
191.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
191.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
190.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
190.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
190.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
188.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
187.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
187.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
186.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
186.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
186.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
185.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
184.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
184.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
181.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
181.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
179.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
179.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
174.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
174.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
174.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
173.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
172.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
170.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
168.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
167.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
165.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
164.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
162.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
161.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
161.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
160.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
158.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
156.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
155.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
155.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
153.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
150.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
143.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
141.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
134.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
132.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
132.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
127.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
123.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.