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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 269.4
Min RPKM: 31.3
Std RPKM: 55.2
Median RPKM: 115.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
269.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
256.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
248.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
225.9
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
219.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
219.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
208.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
205.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
200.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
193.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
193.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
189.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
189.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
188.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
185.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
183.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
183.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
181.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
179.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
175.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
171.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
168.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
168.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
167.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
167.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
160.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
151.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
150.4
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
149.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
147.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
145.9
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
144.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
143.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
135.6
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
131.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
130.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
130.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
130.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
130.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
128.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
127.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
126.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
125.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
122.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
121.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
121.1
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
115.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
115.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
114.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
111.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
111.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
109.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
108.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
106.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
106.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
105.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
103.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
101.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
101.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
100.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
98.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
97.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
96.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
94.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
93.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
92.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
91.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
87.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
85.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
84.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
75.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
73.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
69.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
67.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
66.3
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
66.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
66.1
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
66.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
65.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
65.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
65.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
63.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
60.2
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
59.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
54.2
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
47.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
46.9
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
45.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
44.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
44.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
44.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
43.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
32.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
31.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.