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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 994.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 342.0
Min RPKM: 99.5
Std RPKM: 54.0
Median RPKM: 237.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
342.0
GTEX-X585-3026-SM-46MWF
50-59 years, male
333.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
312.3
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
311.9
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
310.7
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
308.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
307.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
305.4
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
304.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
298.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
297.3
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
294.6
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
294.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
286.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
286.2
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
285.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
285.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
284.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
282.5
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
280.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
278.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
278.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
278.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
277.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
276.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
274.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
274.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
274.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
274.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
271.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
271.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
269.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
268.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
266.5
GTEX-11PRG-2926-SM-5987A
50-59 years, male
266.4
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
265.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
264.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
259.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
259.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
258.2
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
257.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
257.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
256.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
256.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
255.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
253.9
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
252.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
251.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
250.4
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
250.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
249.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
248.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
246.9
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
246.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
246.3
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
246.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
239.4
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
235.9
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
235.1
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
232.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
230.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
229.2
GTEX-1128S-2726-SM-5H12C
60-69 years, female
226.3
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
225.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
224.2
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
223.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
221.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
220.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
219.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
218.7
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
213.7
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
211.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
211.1
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
208.8
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
208.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
207.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
202.8
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
196.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
195.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
191.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
191.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
190.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
189.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
189.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
187.8
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
187.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
185.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
185.0
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
181.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
180.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
176.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
175.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
174.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
174.0
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
173.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
168.8
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
168.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
167.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
167.9
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
167.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
163.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
157.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
155.2
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
155.0
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
150.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
148.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
139.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
136.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
127.9
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
123.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
122.2
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
117.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
117.5
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
99.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 236.9
Samples: 108
Max RPKM: 400.1
Min RPKM: 88.0
Std RPKM: 70.3
Median RPKM: 253.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
400.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
369.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
358.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
357.4
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
347.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
333.1
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
332.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
331.5
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
322.4
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
322.2
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
321.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
318.6
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
316.6
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
316.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
314.7
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
314.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
311.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
309.9
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
303.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
302.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
300.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
299.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
299.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
299.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
297.3
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
296.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
294.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
292.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
291.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
289.3
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
289.0
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
285.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
279.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
278.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
277.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
276.2
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
274.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
274.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
274.1
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
272.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
272.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
271.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
271.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
271.2
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
270.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
268.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
267.1
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
264.2
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
263.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
262.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
262.4
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
254.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
254.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
253.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
252.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
245.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
242.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
237.2
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
236.4
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
229.4
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
222.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
218.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
217.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
214.5
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
213.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
211.3
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
209.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
209.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
209.4
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
208.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
199.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
196.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
194.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
194.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
192.8
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
192.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
191.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
190.4
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
190.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
188.5
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
181.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
178.3
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
177.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
176.4
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
175.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
171.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
170.8
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
170.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
169.2
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
153.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
152.8
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
147.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
142.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
142.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
140.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
139.3
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
135.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
133.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
131.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
124.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
124.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
122.0
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
121.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
120.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
116.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
111.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
110.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
88.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.