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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 279.7
Min RPKM: 72.2
Std RPKM: 48.2
Median RPKM: 176.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
279.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
278.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
267.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
265.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
262.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
258.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
257.9
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
254.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
244.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
241.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
234.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
232.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
229.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
229.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
228.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
227.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
223.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
220.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
218.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
216.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
216.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
216.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
215.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
215.1
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
215.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
214.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
212.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
211.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
210.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
207.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
205.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
205.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
203.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
202.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
201.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
200.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
199.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
199.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
199.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
198.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
195.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
192.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
192.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
189.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
188.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
188.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
188.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
185.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
184.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
182.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
181.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
179.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
178.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
177.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
177.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
177.0
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
176.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
176.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
176.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
174.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
174.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
173.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
173.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
173.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
172.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
172.2
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
170.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
166.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
165.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
165.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
163.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
162.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
159.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
156.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
155.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
155.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
155.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
155.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
155.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
151.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
150.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
148.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
147.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
146.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
141.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
141.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
140.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
138.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
136.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
135.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
133.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
131.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
127.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
126.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
126.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
126.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
124.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
122.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
121.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
120.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
119.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
115.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
115.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
110.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
110.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
108.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
105.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
103.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
100.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
97.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
93.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
85.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
81.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
77.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
73.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
72.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
72.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.