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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 261.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 275.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 157.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 311.8
Min RPKM: 25.8
Std RPKM: 41.5
Median RPKM: 93.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
311.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
259.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
235.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
202.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
195.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
179.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
174.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
174.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
169.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
165.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
163.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
163.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
158.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
157.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
155.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
154.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
152.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
151.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
150.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
149.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
148.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
146.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
146.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
146.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
145.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
143.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
142.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
142.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
141.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
137.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
137.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
137.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
137.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
137.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
134.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
133.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
132.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
131.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
130.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
129.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
129.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
128.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
126.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
125.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
125.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
124.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
122.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
121.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
121.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
121.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
121.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
120.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
120.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
120.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
120.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
119.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
118.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
117.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
116.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
115.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
115.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
115.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
115.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
114.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
114.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
114.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
113.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
113.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
112.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
112.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
111.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
111.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
110.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
110.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
110.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
110.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
109.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
109.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
109.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
108.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
107.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
106.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
106.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
105.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
105.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
105.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
104.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
104.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
103.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
101.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
100.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
99.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
99.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
98.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
98.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
98.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
97.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
97.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
97.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
97.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
97.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
97.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
96.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
95.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
94.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
94.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
93.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
93.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
93.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
93.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
92.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
92.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
92.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
91.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
90.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
90.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
90.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
89.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
88.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
88.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
88.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
87.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
87.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
87.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
87.3
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
87.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
85.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
84.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
84.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
84.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
83.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
83.5
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
83.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
82.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
80.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
80.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
80.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
80.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
80.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
79.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
79.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
79.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
78.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
78.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
77.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
76.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
73.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
73.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
72.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
72.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
72.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
72.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
71.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
71.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
71.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
70.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
70.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
68.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
67.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
66.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
66.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
66.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
65.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
65.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
64.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
62.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
61.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
61.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
60.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
59.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
59.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
59.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
59.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
59.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
59.0
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
58.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
57.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
57.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
56.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
56.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
55.2
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
55.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
54.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
53.8
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
53.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
53.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
53.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
52.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
51.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
49.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
49.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
48.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
48.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
47.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
45.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
45.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
44.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
44.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
44.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
41.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
40.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
39.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
39.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
39.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
37.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
37.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
35.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
34.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
34.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
33.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
32.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
31.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
30.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
25.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.