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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 1668.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 1669.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1004
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 1781.6
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 1917.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 1428.9
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 1435.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 1569.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1650.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 974.1
Min RPKM: 179.2
Std RPKM: 163.7
Median RPKM: 538.5
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
974.1
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
967.9
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
922.0
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
902.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
889.3
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
883.9
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
882.5
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
870.9
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
870.7
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
851.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
850.3
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
823.1
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
810.9
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
809.6
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
805.0
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
791.3
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
788.5
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
786.8
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
784.2
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
783.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
780.8
GTEX-11OF3-1826-SM-5987N
60-69 years, male
759.6
GTEX-117XS-2026-SM-5GID1
60-69 years, male
758.3
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
740.5
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
738.9
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
729.5
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
727.2
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
723.7
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
721.5
GTEX-11DXZ-2126-SM-59881
50-59 years, male
718.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
717.2
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
716.4
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
716.2
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
715.6
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
715.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
712.4
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
709.9
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
686.9
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
680.3
GTEX-Y111-2426-SM-4TT23
50-59 years, male
675.2
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
674.8
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
672.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
667.7
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
660.4
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
657.4
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
654.9
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
648.9
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
640.1
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
639.6
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
632.3
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
632.0
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
630.4
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
628.1
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
621.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
617.8
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
615.5
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
612.4
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
612.2
GTEX-REY6-0126-SM-48FDT
60-69 years, male
605.9
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
605.6
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
604.2
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
600.4
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
598.6
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
592.5
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
589.0
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
587.5
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
587.2
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
583.4
GTEX-X261-2326-SM-4PQYU
50-59 years, male
581.4
GTEX-12696-0226-SM-5EGL3
60-69 years, male
575.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
575.4
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
574.3
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
570.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
568.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
565.0
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
561.4
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
555.8
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
554.8
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
552.7
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
551.9
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
547.5
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
547.2
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
545.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
544.7
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
543.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
539.6
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
537.4
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
531.1
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
529.5
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
523.8
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
523.6
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
521.5
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
517.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
514.0
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
513.9
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
512.8
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
511.4
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
509.6
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
509.1
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
508.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
508.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
506.2
GTEX-13111-1526-SM-5EGJX
50-59 years, male
497.4
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
496.8
GTEX-QLQW-1026-SM-447A9
30-39 years, male
494.8
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
491.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
488.3
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
487.7
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
484.8
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
481.2
GTEX-S95S-1126-SM-4B64E
60-69 years, male
477.4
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
472.9
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
471.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
469.8
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
463.1
GTEX-R55C-1426-SM-48FED
40-49 years, male
462.3
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
462.3
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
461.2
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
460.9
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
460.5
GTEX-V955-1926-SM-4KL1L
60-69 years, male
460.0
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
459.3
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
457.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
455.0
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
453.6
GTEX-S33H-0126-SM-4AD62
30-39 years, male
451.1
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
447.0
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
447.0
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
442.1
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
440.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
439.2
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
439.0
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
438.6
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
438.6
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
436.0
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
425.5
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
418.6
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
414.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
412.4
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
411.0
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
405.7
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
394.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
391.6
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
390.0
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
387.6
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
385.6
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
381.4
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
380.1
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
376.5
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
374.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
353.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
348.4
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
347.5
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
342.2
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
338.7
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
338.6
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
338.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
337.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
332.8
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
328.1
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
321.7
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
321.5
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
316.8
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
304.5
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
304.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
292.2
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
291.3
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
285.2
GTEX-XPT6-1626-SM-4B655
20-29 years, male
278.6
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
265.6
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
254.5
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
179.2
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.