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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 612.6
Min RPKM: 228.3
Std RPKM: 79.4
Median RPKM: 361.2
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
612.6
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
568.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
534.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
533.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
513.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
512.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
503.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
498.7
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
492.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
478.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
477.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
473.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
471.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
466.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
464.4
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
463.6
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
463.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
461.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
449.9
GTEX-QCQG-0226-SM-48U28
50-59 years, female
449.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
448.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
447.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
439.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
438.6
GTEX-144GN-2126-SM-5O99D
50-59 years, male
436.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
435.2
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
433.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
433.0
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
430.8
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
426.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
426.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
416.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
416.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
415.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
411.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
405.2
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
404.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
392.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
392.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
388.1
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
386.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
386.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
385.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
384.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
383.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
381.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
374.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
372.3
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
372.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
369.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
363.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
362.9
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
359.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
356.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
351.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
351.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
348.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
347.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
342.2
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
341.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
340.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
339.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
339.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
337.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
334.9
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
331.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
329.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
328.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
325.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
323.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
322.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
319.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
318.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
317.8
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
317.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
316.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
316.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
316.6
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
315.6
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
314.7
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
311.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
309.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
309.1
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
302.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
300.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
299.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
299.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
298.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
298.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
296.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
288.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
286.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
284.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
274.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
272.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
271.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
269.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
261.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
258.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
258.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
255.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
252.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
234.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
228.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.