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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 317.0
Min RPKM: 59.2
Std RPKM: 32.8
Median RPKM: 114.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
317.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
217.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
202.3
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
184.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
178.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
167.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
164.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
162.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
160.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
159.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
158.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
156.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
155.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
153.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
152.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
149.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
148.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
147.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
146.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
142.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
141.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
141.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
140.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
139.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
136.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
135.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
132.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
132.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
132.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
129.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
129.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
128.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
128.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
128.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
127.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
126.6
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
126.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
126.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
126.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
125.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
125.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
123.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
123.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
122.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
121.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
121.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
121.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
120.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
120.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
120.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
119.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
119.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
119.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
118.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
117.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
116.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
115.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
115.0
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
114.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
113.9
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
113.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
113.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
113.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
112.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
111.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
110.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
110.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
109.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
109.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
109.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
108.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
107.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
107.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
106.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
106.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
105.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
105.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
105.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
104.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
104.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
102.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
102.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
102.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
101.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
101.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
98.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
98.1
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
97.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
97.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
97.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
97.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
96.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
95.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
95.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
95.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
94.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
93.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
93.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
93.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
93.2
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
92.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
92.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
91.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
91.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
90.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
88.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
87.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
87.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
87.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
84.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
80.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
79.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
78.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
65.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
63.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
61.8
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
59.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.