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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1022.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 837.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 718.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1158.0
Min RPKM: 138.9
Std RPKM: 139.4
Median RPKM: 329.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1158.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1035.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
799.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
762.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
717.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
657.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
653.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
645.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
631.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
616.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
606.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
592.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
574.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
569.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
565.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
559.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
554.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
554.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
547.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
523.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
521.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
516.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
503.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
503.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
501.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
500.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
500.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
479.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
475.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
468.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
467.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
466.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
465.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
462.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
457.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
453.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
448.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
442.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
440.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
439.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
434.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
429.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
428.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
428.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
426.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
424.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
423.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
423.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
422.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
422.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
419.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
418.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
417.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
415.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
415.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
414.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
412.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
408.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
407.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
402.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
401.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
401.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
401.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
400.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
397.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
395.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
391.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
391.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
390.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
389.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
384.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
383.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
376.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
375.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
374.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
374.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
372.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
372.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
372.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
368.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
368.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
365.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
362.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
362.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
361.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
360.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
360.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
359.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
357.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
356.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
354.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
354.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
346.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
346.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
341.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
341.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
340.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
339.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
339.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
339.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
336.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
334.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
333.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
333.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
332.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
331.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
330.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
328.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
327.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
324.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
324.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
322.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
316.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
316.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
315.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
315.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
313.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
312.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
311.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
308.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
307.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
303.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
301.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
300.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
300.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
300.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
299.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
296.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
296.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
294.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
293.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
291.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
291.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
287.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
286.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
286.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
285.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
284.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
283.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
283.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
283.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
282.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
280.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
280.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
280.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
280.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
279.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
276.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
276.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
274.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
274.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
274.0
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
274.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
271.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
269.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
269.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
267.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
265.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
264.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
263.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
263.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
263.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
262.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
261.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
260.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
259.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
259.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
254.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
253.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
252.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
252.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
249.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
245.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
243.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
242.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
241.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
241.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
239.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
236.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
235.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
233.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
232.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
232.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
230.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
227.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
224.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
224.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
224.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
222.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
221.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
218.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
218.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
218.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
211.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
208.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
207.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
207.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
205.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
195.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
194.1
GTEX-144GM-0926-SM-5O994
20-29 years, male
189.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
189.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
189.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
187.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
185.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
183.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
181.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
181.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
167.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
162.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
161.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
150.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
147.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
138.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.