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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 124.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 195.6
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 87.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 167
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 95.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 209.7
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 120.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 322.1
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 235.0
Min RPKM: 3.8
Std RPKM: 42.5
Median RPKM: 52.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
235.0
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
209.5
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
172.0
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
170.4
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
161.5
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
146.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
140.7
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
136.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
124.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
123.5
GTEX-11ZUS-2526-SM-59872
30-39 years, male
123.3
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
117.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
116.7
GTEX-YECK-1926-SM-4W21H
60-69 years, male
113.2
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
112.3
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
109.1
GTEX-RN64-1826-SM-48FDV
50-59 years, male
107.6
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
105.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
97.4
GTEX-R53T-0326-SM-48FEC
50-59 years, female
96.0
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
92.8
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
91.9
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
90.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
88.4
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
86.7
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
84.8
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
83.9
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
83.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
83.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
80.5
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
80.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
76.4
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
72.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
71.9
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
71.5
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
70.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
69.9
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
69.7
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
68.0
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
65.7
GTEX-RU72-1426-SM-46MUF
50-59 years, female
65.5
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
65.5
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
64.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
63.6
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
63.4
GTEX-REY6-1226-SM-48FDR
60-69 years, male
61.1
GTEX-13112-1426-SM-5EGH8
50-59 years, male
60.8
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
59.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
58.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
58.5
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
58.3
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
58.1
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
57.7
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
55.9
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
55.7
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
55.2
GTEX-1399T-0826-SM-5IFES
60-69 years, male
54.5
GTEX-S33H-1626-SM-4AD68
30-39 years, male
54.1
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
53.8
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
52.5
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
51.8
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
51.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
51.1
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
50.9
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
48.1
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
47.7
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
45.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
44.4
GTEX-P78B-1326-SM-3P611
40-49 years, female
43.8
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
43.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
43.2
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
42.4
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
41.5
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
37.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
37.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
36.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
36.4
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
34.8
GTEX-12696-0826-SM-5EGGE
60-69 years, male
34.6
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
34.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
33.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
33.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
33.7
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
33.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
33.0
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
32.5
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
31.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
29.4
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
29.0
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
28.7
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
28.1
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
28.0
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
27.8
GTEX-QEL4-1226-SM-447A4
50-59 years, male
27.1
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
27.0
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
25.7
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
25.3
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
25.3
GTEX-Q734-0326-SM-48U15
40-49 years, female
24.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
24.9
GTEX-S32W-1926-SM-4AD63
50-59 years, female
24.6
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
24.5
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
23.5
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
23.4
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
22.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
22.9
GTEX-13113-1326-SM-5GCOI
60-69 years, female
22.2
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
21.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
13.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
13.6
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
12.7
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
11.5
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
10.3
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
9.6
GTEX-11GSP-0626-SM-5986T
60-69 years, female
8.5
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
8.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
8.4
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
7.7
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
3.8
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.