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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 46.0
Min RPKM: 9.8
Std RPKM: 9.1
Median RPKM: 23.4
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
46.0
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
45.7
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
42.0
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
41.3
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
38.5
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
36.4
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
36.4
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
34.4
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
32.6
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
32.2
GTEX-X261-2426-SM-4PQZU
50-59 years, male
32.2
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
32.0
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
31.9
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
31.5
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
30.7
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
30.1
GTEX-13113-1526-SM-5EGHV
60-69 years, female
29.1
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
28.2
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
27.8
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
27.8
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
27.6
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
26.6
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
26.6
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
26.5
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
26.1
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
25.2
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
25.2
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
23.5
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
23.4
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
22.0
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
21.7
GTEX-1445S-2926-SM-5O993
60-69 years, male
21.3
GTEX-13O21-1926-SM-5MR39
50-59 years, male
21.1
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
20.8
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
20.6
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
20.0
GTEX-Y111-2626-SM-4TT24
50-59 years, male
19.7
GTEX-11P82-0926-SM-5986X
20-29 years, male
19.3
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
18.6
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
17.9
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
17.7
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
17.4
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
16.3
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
16.0
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
15.7
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
15.6
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
15.1
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
14.5
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
14.4
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
14.3
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
13.9
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
11.9
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
11.2
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
10.9
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
10.5
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
10.4
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
9.8
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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