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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 169.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 85.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 83.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 290.9
Min RPKM: 42.8
Std RPKM: 38.0
Median RPKM: 81.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
290.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
264.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
216.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
211.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
208.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
205.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
198.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
197.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
189.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
183.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
172.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
169.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
168.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
160.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
152.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
152.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
151.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
149.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
146.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
143.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
138.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
137.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
135.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
134.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
131.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
129.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
128.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
125.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
124.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
122.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
122.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
121.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
121.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
120.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
119.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
119.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
117.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
116.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
116.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
115.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
113.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
113.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
112.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
112.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
111.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
108.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
107.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
107.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
107.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
106.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
105.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
105.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
104.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
104.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
103.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
101.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
101.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
99.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
99.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
98.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
98.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
98.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
97.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
97.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
96.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
96.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
96.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
96.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
96.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
95.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
95.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
95.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
95.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
95.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
94.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
94.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
94.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
93.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
91.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
90.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
90.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
89.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
89.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
89.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
88.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
88.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
87.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
87.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
87.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
87.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
87.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
86.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
85.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
85.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
85.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
85.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
84.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
84.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
84.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
84.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
84.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
83.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
83.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
82.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
81.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
81.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
81.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
81.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
81.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
81.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
81.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
80.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
80.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
79.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
79.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
79.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
79.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
79.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
78.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
78.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
78.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
77.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
77.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
77.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
77.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
77.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
77.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
76.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
76.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
76.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
76.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
76.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
75.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
75.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
75.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
75.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
75.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
75.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
75.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
74.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
74.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
74.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
74.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
74.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
74.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
73.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
73.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
73.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
73.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
73.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
73.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
73.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
72.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
72.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
72.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
71.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
71.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
69.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
69.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
69.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
69.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
69.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
68.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
67.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
67.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
67.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
66.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
66.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
66.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
65.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
65.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
65.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
65.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
65.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
65.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
65.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
64.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
64.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
63.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
63.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
62.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
62.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
62.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
62.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
62.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
62.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
61.6
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
61.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
60.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
60.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
60.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
60.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
59.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
59.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
59.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
59.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
58.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
57.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
57.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
56.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
54.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
54.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
54.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
52.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
52.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
50.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
49.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
49.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
49.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
47.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
44.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
44.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
43.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
42.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.