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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 118.6
Min RPKM: 42.1
Std RPKM: 17.6
Median RPKM: 67.2
GTEX-Y111-2626-SM-4TT24
50-59 years, male
118.6
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
113.6
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
106.5
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
106.2
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
105.9
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
104.8
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
96.4
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
90.5
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
87.7
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
86.8
GTEX-1445S-2926-SM-5O993
60-69 years, male
85.3
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
84.1
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
83.7
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
82.0
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
76.8
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
75.6
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
75.5
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
74.1
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
72.8
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
72.8
GTEX-X261-2426-SM-4PQZU
50-59 years, male
72.5
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
72.4
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
69.9
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
69.8
GTEX-11P82-0926-SM-5986X
20-29 years, male
68.9
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
67.6
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
67.5
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
67.2
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
67.2
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
66.6
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
66.0
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
65.3
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
65.2
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
65.2
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
65.1
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
63.2
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
63.2
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
62.2
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
61.6
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
60.5
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
59.4
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
58.4
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
58.3
GTEX-13O21-1926-SM-5MR39
50-59 years, male
58.2
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
57.6
GTEX-13113-1526-SM-5EGHV
60-69 years, female
57.1
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
56.5
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
56.4
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
55.6
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
54.5
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
52.8
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
52.6
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
52.1
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
45.9
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
45.8
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
42.8
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
42.1
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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