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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 55.2
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 42.7
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 34.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 68.8
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 60
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 44.1
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 54
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 65.6
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 190.0
Min RPKM: 21.9
Std RPKM: 32.8
Median RPKM: 70.9
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
190.0
GTEX-S32W-1926-SM-4AD63
50-59 years, female
166.7
GTEX-REY6-1226-SM-48FDR
60-69 years, male
165.2
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
161.5
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
158.7
GTEX-QEL4-1226-SM-447A4
50-59 years, male
135.4
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
134.5
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
132.4
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
132.1
GTEX-S33H-1626-SM-4AD68
30-39 years, male
130.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
129.3
GTEX-X261-1726-SM-4PQYT
50-59 years, male
121.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
121.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
117.0
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
116.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
116.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
116.2
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
113.9
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
113.8
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
113.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
109.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
107.2
GTEX-12696-0826-SM-5EGGE
60-69 years, male
106.3
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
102.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
101.6
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
100.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
99.4
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
98.0
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
96.9
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
93.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
92.8
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
92.6
GTEX-P78B-1326-SM-3P611
40-49 years, female
92.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
92.5
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
92.2
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
92.0
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
91.3
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
89.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
89.7
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
86.3
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
85.7
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
85.5
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
85.2
GTEX-RU72-1426-SM-46MUF
50-59 years, female
81.4
GTEX-Q734-0326-SM-48U15
40-49 years, female
81.2
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
81.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
80.5
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
80.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
79.5
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
79.4
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
79.3
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
78.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
77.1
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
76.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
75.0
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
75.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
72.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
71.9
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
71.9
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
70.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
70.0
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
69.5
GTEX-R53T-0326-SM-48FEC
50-59 years, female
67.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
67.0
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
66.2
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
65.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
65.1
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
64.9
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
63.5
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
63.0
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
63.0
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
61.9
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
61.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
61.6
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
61.2
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
61.1
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
60.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
59.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
59.9
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
59.8
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
59.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
57.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
57.0
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
56.8
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
56.0
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
55.7
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
55.0
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
54.2
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
54.0
GTEX-11ZUS-2526-SM-59872
30-39 years, male
53.4
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
52.7
GTEX-11GSP-0626-SM-5986T
60-69 years, female
52.4
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
51.7
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
50.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
49.8
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
48.8
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
46.5
GTEX-13112-1426-SM-5EGH8
50-59 years, male
46.0
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
45.9
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
45.5
GTEX-YECK-1926-SM-4W21H
60-69 years, male
45.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
44.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
44.1
GTEX-RN64-1826-SM-48FDV
50-59 years, male
42.9
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
42.6
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
41.4
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
41.4
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
41.3
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
40.4
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
39.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
37.8
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
37.7
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
37.4
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
36.9
GTEX-QESD-2026-SM-447BI
20-29 years, male
35.4
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
34.3
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
33.3
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
32.9
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
21.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
