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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 701.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 213.4
Min RPKM: 27.8
Std RPKM: 29.5
Median RPKM: 105.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
213.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
203.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
175.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
170.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
159.6
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
156.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
153.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
152.7
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
151.5
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
151.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
147.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
147.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
146.9
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
145.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
144.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
142.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
138.6
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
137.9
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
137.8
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
135.6
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
134.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
131.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
128.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
127.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
127.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
125.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
124.0
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
123.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
122.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
121.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
120.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
120.4
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
120.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
119.0
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
118.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
118.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
118.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
117.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
117.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
116.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
115.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
115.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
115.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
113.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
113.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
112.9
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
112.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
111.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
110.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
109.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
109.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
108.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
108.1
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
107.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
106.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
105.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
105.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
105.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
105.0
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
104.7
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
104.7
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
103.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
103.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
103.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
102.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
102.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
102.1
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
101.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
101.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
101.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
100.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
98.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
98.4
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
95.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
95.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
95.4
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
92.8
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
91.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
90.9
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
90.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
90.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
89.4
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
88.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
88.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
88.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
87.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
87.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
87.3
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
86.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
85.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
85.8
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
84.7
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
84.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
84.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
83.6
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
82.3
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
81.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
81.0
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
80.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
80.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
80.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
77.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
75.2
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
74.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
73.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
72.1
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
65.0
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
63.6
GTEX-WL46-2926-SM-3LK82
50-59 years, male
62.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
60.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
60.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
58.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
55.9
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
27.8
Show all
Brain - Frontal Cortex (BA9) RPKM: 118.3
Samples: 108
Max RPKM: 257.6
Min RPKM: 44.9
Std RPKM: 44.1
Median RPKM: 111.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
257.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
255.4
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
240.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
224.8
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
219.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
207.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
203.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
203.5
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
193.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
192.7
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
189.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
170.4
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
164.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
163.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
157.6
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
156.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
156.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
153.1
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
151.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
150.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
148.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
145.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
145.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
145.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
144.5
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
142.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
139.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
138.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
138.4
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
137.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
137.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
134.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
134.2
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
133.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
131.6
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
127.8
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
127.5
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
127.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
126.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
126.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
123.5
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
122.5
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
122.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
122.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
121.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
120.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
119.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
119.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
117.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
116.0
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
114.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
114.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
112.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
111.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
111.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
110.9
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
107.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
107.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
107.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
106.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
104.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
104.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
104.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
103.8
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
103.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
100.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
99.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
98.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
94.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
94.5
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
93.2
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
92.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
92.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
91.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
91.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
91.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
88.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
87.9
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
87.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
87.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
86.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
84.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
83.8
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
82.6
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
82.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
82.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
82.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
82.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
79.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
79.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
78.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
76.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
76.5
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
73.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
73.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
73.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
73.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
68.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
66.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
65.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
65.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
62.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
62.3
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
61.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
61.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
57.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
53.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
44.9
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.