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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 439.0
Min RPKM: 0.0
Std RPKM: 100.2
Median RPKM: 52.9
GTEX-111YS-1426-SM-5GID8
60-69 years, male
439.0
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
424.2
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
341.5
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
325.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
270.5
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
262.4
GTEX-1122O-1326-SM-5H11F
60-69 years, female
244.9
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
244.9
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
240.6
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
238.9
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
230.0
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
219.8
GTEX-ZTSS-0926-SM-59865
40-49 years, male
203.2
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
186.7
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
185.5
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
179.2
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
175.2
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
164.2
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
158.6
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
158.0
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
154.9
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
151.3
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
147.0
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
143.9
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
142.7
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
139.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
135.4
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
124.7
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
114.2
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
103.9
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
95.7
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
93.1
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
85.2
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
83.8
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
80.1
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
73.5
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
68.5
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
62.4
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
59.9
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
59.5
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
56.2
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
55.7
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
55.1
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
53.5
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
52.2
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
49.3
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
46.3
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
44.8
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
43.4
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
43.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
41.9
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
39.9
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
35.3
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
33.3
GTEX-13113-1226-SM-5EGHT
60-69 years, female
33.2
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
31.5
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
27.2
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
26.0
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
21.5
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
21.5
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
18.7
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
17.9
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
17.4
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
14.6
GTEX-13O61-1326-SM-5KM31
60-69 years, male
12.9
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
9.9
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
7.7
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
7.0
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
6.7
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
6.2
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
5.4
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
5.4
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
4.9
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
4.6
GTEX-117YX-0326-SM-5GICL
50-59 years, male
2.1
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
1.9
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
1.6
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
1.5
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
0.9
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
0.6
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
0.6
GTEX-1192X-2526-SM-59868
50-59 years, male
0.5
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
0.5
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
0.4
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.2
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
0.2
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
0.1
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
0.0
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
