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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 705.1
Min RPKM: 148.3
Std RPKM: 121.3
Median RPKM: 326.3
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
705.1
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
676.9
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
635.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
605.3
GTEX-P78B-1926-SM-3P616
40-49 years, female
601.9
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
579.6
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
579.1
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
565.3
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
562.0
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
560.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
545.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
538.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
505.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
489.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
486.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
479.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
460.0
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
459.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
450.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
444.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
433.6
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
420.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
419.7
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
417.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
410.4
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
408.1
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
405.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
401.0
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
400.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
392.7
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
387.8
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
385.0
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
380.8
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
380.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
378.9
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
371.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
368.9
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
366.5
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
363.1
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
363.1
GTEX-11I78-1926-SM-59878
50-59 years, female
360.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
353.8
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
352.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
350.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
348.3
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
342.2
GTEX-QCQG-1426-SM-48U22
50-59 years, female
341.7
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
331.2
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
326.3
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
322.1
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
313.3
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
310.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
303.7
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
303.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
302.7
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
302.2
GTEX-S341-0726-SM-4AD5R
40-49 years, female
298.8
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
296.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
295.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
285.2
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
282.9
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
282.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
282.1
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
280.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
279.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
278.7
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
277.3
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
275.4
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
269.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
266.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
264.9
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
262.3
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
254.2
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
252.5
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
251.3
GTEX-S32W-1226-SM-4AD67
50-59 years, female
251.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
249.7
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
245.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
243.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
239.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
238.5
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
237.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
232.5
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
232.0
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
231.5
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
225.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
225.1
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
218.7
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
218.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
213.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
208.6
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
206.0
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
204.5
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
200.4
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
192.2
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
190.5
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
148.3
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.