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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 456.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 51.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 108.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 448.6
Min RPKM: 29.3
Std RPKM: 61.4
Median RPKM: 139.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
448.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
346.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
327.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
315.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
304.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
304.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
289.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
271.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
256.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
249.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
248.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
240.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
239.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
238.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
238.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
230.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
229.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
227.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
227.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
224.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
220.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
219.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
215.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
215.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
209.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
206.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
203.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
202.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
202.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
200.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
200.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
200.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
199.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
199.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
199.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
196.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
196.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
195.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
195.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
195.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
195.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
195.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
192.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
192.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
187.8
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
185.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
185.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
184.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
184.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
183.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
179.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
179.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
178.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
177.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
177.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
175.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
175.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
174.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
173.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
171.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
170.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
168.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
168.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
167.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
167.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
166.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
166.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
164.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
161.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
161.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
161.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
160.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
159.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
159.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
158.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
157.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
157.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
157.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
156.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
156.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
155.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
154.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
154.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
153.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
152.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
152.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
152.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
151.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
150.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
150.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
146.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
145.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
145.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
145.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
144.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
144.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
144.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
144.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
143.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
143.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
143.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
143.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
143.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
142.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
141.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
140.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
139.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
138.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
138.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
138.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
137.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
137.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
136.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
136.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
136.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
136.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
135.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
134.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
134.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
133.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
132.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
132.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
130.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
129.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
129.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
129.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
129.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
126.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
126.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
124.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
124.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
122.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
122.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
121.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
120.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
119.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
119.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
118.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
117.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
117.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
116.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
115.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
115.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
114.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
112.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
112.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
111.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
110.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
109.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
108.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
107.3
GTEX-1192X-2326-SM-5987X
50-59 years, male
107.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
107.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
105.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
105.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
105.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
105.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
103.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
103.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
103.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
102.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
98.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
97.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
96.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
96.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
96.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
96.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
96.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
95.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
95.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
95.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
91.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
89.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
89.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
89.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
88.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
85.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
85.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
84.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
84.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
83.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
82.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
81.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
81.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
81.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
79.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
79.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
79.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
78.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
78.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
77.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
77.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
77.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
75.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
74.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
69.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
68.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
68.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
66.1
GTEX-144GM-0926-SM-5O994
20-29 years, male
63.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
63.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
63.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
61.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
59.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
57.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
57.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
56.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
51.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
51.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
44.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
42.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
34.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
30.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
29.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.