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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 398.2
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 199.2
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 304.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 335.1
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 408.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 433
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 250.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 297.5
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 619.7
Min RPKM: 30.9
Std RPKM: 99.4
Median RPKM: 91.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
619.7
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
506.1
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
460.4
GTEX-QEL4-1226-SM-447A4
50-59 years, male
371.0
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
370.2
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
365.3
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
341.8
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
303.5
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
298.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
296.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
280.8
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
275.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
271.5
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
269.8
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
202.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
183.0
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
181.8
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
166.7
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
163.3
GTEX-REY6-1226-SM-48FDR
60-69 years, male
154.6
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
152.3
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
142.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
141.0
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
139.5
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
136.7
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
135.8
GTEX-X261-1726-SM-4PQYT
50-59 years, male
129.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
129.3
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
129.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
128.3
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
127.8
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
127.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
123.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
122.2
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
122.1
GTEX-S33H-1626-SM-4AD68
30-39 years, male
120.6
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
118.7
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
117.5
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
114.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
113.5
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
113.2
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
112.1
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
111.6
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
107.8
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
107.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
106.9
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
106.4
GTEX-12696-0826-SM-5EGGE
60-69 years, male
105.3
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
102.8
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
99.5
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
98.0
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
97.1
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
96.8
GTEX-11GSP-0626-SM-5986T
60-69 years, female
96.0
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
95.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
95.9
GTEX-RU72-1426-SM-46MUF
50-59 years, female
93.1
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
92.4
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
92.1
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
91.2
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
89.7
GTEX-13113-1326-SM-5GCOI
60-69 years, female
88.9
GTEX-QESD-2026-SM-447BI
20-29 years, male
85.9
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
85.4
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
85.0
GTEX-P78B-1326-SM-3P611
40-49 years, female
84.4
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
82.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
82.1
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
76.0
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
75.6
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
75.3
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
73.8
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
73.6
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
73.5
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
73.3
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
72.7
GTEX-YECK-1926-SM-4W21H
60-69 years, male
72.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
72.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
71.3
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
70.4
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
70.2
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
68.8
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
68.6
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
67.7
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
65.8
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
65.2
GTEX-R53T-0326-SM-48FEC
50-59 years, female
65.1
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
64.4
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
64.2
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
61.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
61.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
60.8
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
60.6
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
60.5
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
59.8
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
59.6
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
59.4
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
57.8
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
57.4
GTEX-13112-1426-SM-5EGH8
50-59 years, male
56.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
56.1
GTEX-RN64-1826-SM-48FDV
50-59 years, male
55.0
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
54.8
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
54.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
53.3
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
51.5
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
50.4
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
49.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
49.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
48.4
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
47.6
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
45.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
45.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
44.0
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
43.0
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
42.1
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
38.6
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
33.3
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
30.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
