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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 431.7
Min RPKM: 100.1
Std RPKM: 54.8
Median RPKM: 211.2
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
431.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
357.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
345.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
308.6
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
298.5
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
297.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
295.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
290.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
283.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
283.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
282.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
282.5
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
281.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
275.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
272.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
270.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
265.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
265.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
260.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
259.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
257.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
257.3
GTEX-QV31-0126-SM-447BP
30-39 years, male
255.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
255.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
253.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
252.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
247.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
245.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
244.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
240.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
239.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
239.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
237.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
235.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
234.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
230.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
230.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
229.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
228.3
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
224.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
222.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
220.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
217.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
216.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
216.1
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
215.4
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
215.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
212.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
212.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
211.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
211.3
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
211.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
211.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
209.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
208.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
208.6
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
206.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
203.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
202.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
202.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
200.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
198.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
197.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
196.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
195.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
194.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
192.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
190.1
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
189.5
GTEX-PX3G-0926-SM-48U12
20-29 years, female
186.5
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
183.3
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
182.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
182.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
182.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
181.8
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
181.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
177.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
176.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
176.1
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
173.3
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
172.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
170.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
170.8
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
170.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
168.3
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
167.7
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
166.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
162.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
161.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
155.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
155.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
155.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
152.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
145.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
142.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
138.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
138.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
132.1
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
130.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
128.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
124.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
123.7
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
118.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
100.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.