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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1710.1
Min RPKM: 437.2
Std RPKM: 240.6
Median RPKM: 767.5
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1710.1
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1630.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1498.9
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1466.2
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1245.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1161.5
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1092.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1090.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1026.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1019.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1015.6
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1013.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1003.5
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
984.6
GTEX-S32W-1226-SM-4AD67
50-59 years, female
982.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
979.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
977.4
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
972.8
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
961.6
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
961.3
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
958.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
930.8
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
924.5
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
919.8
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
912.4
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
894.2
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
889.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
884.6
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
884.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
880.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
878.6
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
870.1
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
869.6
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
866.1
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
864.2
GTEX-Q734-0726-SM-48TZP
40-49 years, female
857.5
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
853.1
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
848.1
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
843.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
835.9
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
822.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
819.5
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
817.0
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
806.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
785.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
785.2
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
784.4
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
772.3
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
767.5
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
755.9
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
746.3
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
720.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
719.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
716.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
715.9
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
707.7
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
704.7
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
693.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
682.7
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
682.0
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
679.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
674.9
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
662.5
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
662.3
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
649.7
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
641.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
638.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
635.4
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
635.2
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
627.3
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
621.3
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
613.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
606.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
605.7
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
604.1
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
593.2
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
586.3
GTEX-S341-0726-SM-4AD5R
40-49 years, female
580.7
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
571.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
570.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
568.8
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
567.8
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
566.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
566.0
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
565.4
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
555.6
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
547.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
537.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
534.5
GTEX-11I78-1926-SM-59878
50-59 years, female
529.8
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
523.9
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
519.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
495.7
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
491.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
453.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
439.7
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
437.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.