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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2265.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 375.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 636.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1148.0
Min RPKM: 45.8
Std RPKM: 191.9
Median RPKM: 458.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
1148.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
1029.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
983.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
951.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
950.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
933.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
924.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
894.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
883.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
860.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
858.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
857.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
853.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
851.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
845.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
838.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
806.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
804.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
802.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
800.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
798.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
772.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
746.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
745.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
744.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
730.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
730.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
713.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
704.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
697.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
688.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
687.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
685.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
684.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
666.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
663.9
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
662.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
654.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
651.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
647.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
633.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
632.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
625.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
625.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
618.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
616.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
614.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
608.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
605.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
604.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
603.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
601.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
599.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
599.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
596.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
595.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
590.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
589.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
588.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
586.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
583.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
581.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
581.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
579.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
579.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
572.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
570.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
567.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
565.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
557.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
556.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
553.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
552.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
552.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
539.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
539.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
537.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
535.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
534.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
531.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
522.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
522.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
517.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
511.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
510.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
504.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
501.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
496.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
490.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
489.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
488.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
485.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
481.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
480.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
479.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
478.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
478.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
476.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
474.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
474.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
472.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
471.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
466.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
466.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
464.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
460.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
460.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
457.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
456.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
456.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
456.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
455.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
454.8
GTEX-117XS-1926-SM-5GICO
60-69 years, male
451.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
450.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
449.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
448.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
448.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
447.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
443.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
440.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
428.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
426.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
426.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
426.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
424.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
420.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
418.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
417.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
413.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
410.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
408.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
401.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
399.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
396.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
395.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
394.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
391.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
385.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
385.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
384.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
381.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
379.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
379.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
378.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
377.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
377.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
374.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
366.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
361.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
360.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
360.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
360.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
359.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
358.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
358.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
358.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
357.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
355.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
351.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
348.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
347.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
347.4
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
346.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
338.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
337.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
336.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
335.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
331.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
330.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
328.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
328.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
326.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
326.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
322.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
321.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
321.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
320.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
318.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
314.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
314.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
308.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
306.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
304.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
302.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
300.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
298.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
297.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
295.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
295.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
295.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
293.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
289.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
280.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
270.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
263.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
257.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
245.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
239.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
234.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
232.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
222.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
217.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
216.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
204.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
204.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
198.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
198.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
188.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
174.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
172.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
168.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
142.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
45.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.