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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 404.6
Min RPKM: 32.9
Std RPKM: 59.2
Median RPKM: 106.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
404.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
280.3
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
256.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
243.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
215.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
208.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
203.3
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
202.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
199.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
198.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
196.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
191.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
188.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
187.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
182.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
177.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
175.7
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
174.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
172.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
167.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
166.2
GTEX-PX3G-0926-SM-48U12
20-29 years, female
165.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
165.4
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
161.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
158.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
153.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
151.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
149.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
147.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
147.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
137.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
135.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
135.2
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
133.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
132.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
129.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
127.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
122.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
121.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
121.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
121.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
119.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
118.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
117.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
114.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
113.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
111.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
110.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
110.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
108.5
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
107.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
106.2
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
106.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
105.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
105.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
104.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
102.6
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
101.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
101.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
101.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
101.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
99.6
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
99.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
98.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
97.5
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
95.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
94.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
93.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
93.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
92.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
86.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
84.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
82.6
GTEX-144GN-2126-SM-5O99D
50-59 years, male
81.5
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
80.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
80.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
80.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
77.1
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
75.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
73.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
73.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
72.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
72.3
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
70.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
67.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
66.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
66.3
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
63.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
62.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
61.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
60.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
59.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
59.3
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
53.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
53.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
52.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
49.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
44.6
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
43.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
42.3
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
38.4
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
36.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
35.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
32.9
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.