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COLON - Expression summary
RNA expressioni
HPA:17.8TPM
GTEx:59.9RPKM
FANTOM5:56.1Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 17.8
overview Male, age 54 Sample 1
TPM: 13.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 8.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 5.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 60
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 30.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 16.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 26.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 19.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 59.9
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 94.7
Samples: 149

Max RPKM: 166.7
Min RPKM: 35.0
Std RPKM: 25.5
Median RPKM: 91.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 166.7
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 152.6
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 148.2
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 147.5
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 145.4
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 144.8
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 142.5
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 140.6
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 138.6
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 137.0
Show all
Colon - Transverse
RPKM: 33.5
Samples: 196

Max RPKM: 152.8
Min RPKM: 1.8
Std RPKM: 31.5
Median RPKM: 21.2
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 152.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 120.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 118.7
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 114.3
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 110.8
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 106.3
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 104.5
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 103.2
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 96.9
GTEX-Y114-1526-SM-4TT79 50-59 years, female 92.5
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 56.1
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 54.9
FF:10014-101C5 62,83,84 years, mixed 56.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.