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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 667.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 25.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 50.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 729.1
Min RPKM: 6.1
Std RPKM: 126.2
Median RPKM: 114.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
729.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
643.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
563.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
537.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
528.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
507.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
504.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
478.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
476.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
447.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
411.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
395.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
385.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
381.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
376.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
355.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
342.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
330.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
325.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
313.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
306.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
303.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
300.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
299.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
295.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
292.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
288.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
288.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
287.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
277.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
277.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
271.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
269.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
268.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
267.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
259.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
257.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
254.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
254.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
245.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
243.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
241.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
238.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
229.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
227.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
225.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
217.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
211.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
206.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
205.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
203.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
202.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
201.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
201.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
199.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
198.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
196.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
194.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
193.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
192.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
188.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
188.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
187.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
185.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
184.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
182.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
180.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
179.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
179.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
175.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
173.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
172.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
172.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
172.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
170.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
169.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
168.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
167.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
166.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
163.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
160.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
158.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
158.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
158.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
156.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
152.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
150.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
145.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
141.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
139.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
139.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
138.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
138.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
135.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
134.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
133.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
131.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
130.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
126.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
119.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
119.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
119.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
118.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
116.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
116.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
116.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
115.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
113.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
112.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
112.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
112.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
110.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
110.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
110.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
110.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
109.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
108.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
107.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
104.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
102.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
101.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
101.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
101.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
100.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
99.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
97.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
93.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
92.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
91.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
90.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
88.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
87.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
87.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
87.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
85.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
83.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
83.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
83.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
82.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
82.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
81.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
80.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
80.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
78.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
77.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
76.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
75.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
74.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
72.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
72.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
71.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
70.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
70.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
70.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
68.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
67.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
66.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
66.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
65.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
64.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
63.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
63.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
61.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
60.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
55.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
54.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
54.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
53.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
49.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
49.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
49.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
48.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
48.3
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
48.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
47.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
46.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
46.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
45.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
43.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
41.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
39.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
38.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
38.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
38.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
37.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
37.0
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
35.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
34.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
34.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
34.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
33.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
33.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
33.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
33.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
32.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
31.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
31.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
30.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
30.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
29.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
29.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
29.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
27.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
25.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
24.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
23.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
21.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
20.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
19.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
18.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
16.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
15.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
15.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
6.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.