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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 411.1
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 348.2
Min RPKM: 52.8
Std RPKM: 60.7
Median RPKM: 193.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
348.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
325.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
302.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
286.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
278.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
265.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
264.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
261.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
259.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
258.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
256.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
255.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
254.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
253.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
247.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
246.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
245.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
244.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
244.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
242.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
241.8
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
238.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
234.9
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
230.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
230.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
227.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
225.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
224.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
223.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
222.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
222.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
221.2
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
218.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
218.7
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
218.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
218.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
217.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
216.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
216.3
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
215.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
214.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
212.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
211.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
211.7
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
210.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
207.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
207.3
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
205.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
205.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
203.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
200.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
199.7
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
199.1
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
196.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
195.8
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
194.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
193.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
192.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
190.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
189.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
186.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
186.1
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
185.0
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
184.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
182.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
181.8
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
181.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
181.4
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
179.6
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
178.6
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
177.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
176.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
174.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
173.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
166.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
164.6
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
164.5
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
163.4
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
162.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
158.9
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
156.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
155.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
148.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
142.8
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
137.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
136.0
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
135.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
134.8
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
134.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
134.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
134.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
133.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
131.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
123.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
120.9
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
115.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
114.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
112.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
106.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
106.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
105.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
104.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
96.0
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
87.4
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
86.5
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
85.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
79.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
78.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
76.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
67.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
58.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
55.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
54.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
52.8
Show all
Brain - Frontal Cortex (BA9) RPKM: 168.8
Samples: 108
Max RPKM: 344.4
Min RPKM: 39.7
Std RPKM: 68.1
Median RPKM: 175.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
344.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
311.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
274.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
274.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
272.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
270.6
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
260.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
260.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
258.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
252.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
252.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
252.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
250.4
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
246.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
245.4
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
243.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
242.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
240.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
238.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
237.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
229.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
227.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
227.3
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
224.6
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
223.3
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
221.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
220.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
219.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
214.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
213.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
212.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
211.3
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
207.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
206.0
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
205.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
205.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
204.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
204.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
201.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
198.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
196.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
196.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
195.8
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
195.7
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
195.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
195.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
193.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
191.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
189.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
188.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
180.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
178.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
178.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
177.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
174.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
173.7
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
173.6
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
172.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
169.2
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
167.5
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
167.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
164.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
164.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
157.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
153.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
150.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
150.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
149.6
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
145.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
144.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
138.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
138.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
137.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
136.7
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
135.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
128.6
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
127.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
127.4
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
126.5
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
125.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
121.5
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
117.8
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
115.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
105.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
105.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
104.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
102.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
100.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
96.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
95.5
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
86.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
80.5
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
78.9
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
77.3
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
75.9
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
70.6
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
67.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
64.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
64.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
63.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
60.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
55.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
47.5
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
44.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
42.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
42.0
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
40.5
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
39.7
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.