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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 708.0
Min RPKM: 23.7
Std RPKM: 162.5
Median RPKM: 268.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
708.0
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
665.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
646.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
644.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
615.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
541.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
539.7
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
525.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
505.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
496.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
491.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
489.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
470.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
456.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
456.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
455.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
454.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
450.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
445.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
439.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
433.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
426.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
421.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
414.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
412.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
410.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
407.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
398.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
391.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
387.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
383.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
383.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
383.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
382.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
368.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
354.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
351.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
350.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
343.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
337.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
330.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
324.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
317.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
312.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
312.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
310.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
309.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
309.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
308.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
300.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
300.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
294.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
290.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
286.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
281.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
279.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
276.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
273.3
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
268.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
263.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
261.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
256.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
255.9
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
253.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
252.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
246.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
232.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
232.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
231.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
229.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
222.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
220.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
194.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
189.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
189.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
188.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
185.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
184.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
179.5
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
179.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
170.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
167.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
164.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
152.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
152.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
149.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
149.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
144.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
137.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
116.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
114.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
112.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
111.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
92.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
89.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
88.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
82.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
78.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
77.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
72.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
72.5
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
71.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
67.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
67.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
64.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
60.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
58.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
53.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
51.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
50.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
49.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
49.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
38.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
37.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
34.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
27.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
23.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.