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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 998.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 437.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 504.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1333.7
Min RPKM: 110.6
Std RPKM: 210.1
Median RPKM: 386.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
1333.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
1166.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
1119.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
1061.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
1013.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
999.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
970.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
871.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
863.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
853.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
847.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
825.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
809.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
800.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
797.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
786.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
785.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
759.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
751.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
744.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
742.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
731.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
724.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
717.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
716.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
716.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
683.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
668.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
666.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
659.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
654.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
651.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
642.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
638.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
630.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
622.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
620.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
619.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
612.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
610.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
596.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
579.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
572.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
570.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
556.3
GTEX-1192X-2326-SM-5987X
50-59 years, male
556.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
555.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
553.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
551.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
548.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
545.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
542.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
541.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
540.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
539.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
535.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
526.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
526.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
522.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
512.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
510.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
508.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
502.5
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
502.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
500.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
492.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
491.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
485.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
480.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
478.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
476.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
473.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
469.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
464.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
463.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
458.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
450.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
449.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
448.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
447.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
441.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
440.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
440.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
438.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
438.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
437.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
433.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
431.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
429.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
427.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
424.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
420.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
419.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
418.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
414.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
408.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
407.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
404.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
400.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
400.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
397.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
393.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
393.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
392.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
391.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
388.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
387.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
384.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
384.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
377.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
372.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
371.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
369.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
365.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
365.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
364.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
361.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
361.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
357.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
356.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
355.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
355.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
355.4
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
352.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
352.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
349.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
347.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
343.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
339.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
336.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
332.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
327.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
324.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
323.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
320.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
318.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
317.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
315.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
313.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
313.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
313.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
312.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
311.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
311.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
309.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
309.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
309.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
308.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
307.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
300.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
298.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
298.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
297.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
297.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
296.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
296.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
295.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
295.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
293.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
293.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
291.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
290.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
288.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
287.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
287.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
285.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
283.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
283.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
282.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
282.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
281.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
277.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
276.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
276.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
275.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
273.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
268.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
268.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
268.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
263.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
261.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
256.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
253.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
253.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
250.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
250.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
249.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
239.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
237.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
235.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
229.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
224.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
223.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
212.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
212.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
209.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
200.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
199.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
197.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
193.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
192.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
188.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
188.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
185.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
180.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
164.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
154.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
154.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
150.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
146.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
136.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
128.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
121.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
110.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.